As first author or corresponding author:

80. Wang-Ren Qiu, Bi-Qian Sun, Hua Tang, Jian Huang*, Hao Lin*. (2017) Identify and analysis crotonylation sites in histone by using support vector machines. Artificial Intelligence In Medicine, Accepted. (2016 IF: 2.009)

79. Hao Lin*, Zhi-Yong Liang, Hua Tang, Wei Chen*. (2017) Identifying sigma70 promoters with novel pseudo nucleotide composition. IEEE/ACM Transactions on Computational Biology and Bioinformatics, Accepted. (2016 IF: 1.955)

78. Pengmian Feng, Jidong Zhang, Hua Tang, Wei Chen*, Hao Lin* (2017) Predicting the Organelle Location of Noncoding RNAs Using Pseudo Nucleotide Compositions. Interdisciplinary Sciences: Computational Life Sciences, Accepted. (2016 IF: 0.753)

77. Fu-Ying Dao, Hui Yang, Zhen-Dong Su, Wuritu Yang, Yun Wu, Ding Hui, Wei Chen*, Hua Tang*, Hao Lin*. (2017) Recent Advances in Conotoxin Classification by using machine learning methods. Molecules, 22: 1057. (2016 IF: 2.861)

76. Hong-Yan Lai, Xin-Xin Chen, Wei Chen, Hua Tang*, Hao Lin*. (2017) Sequence-based predictive modeling to identify cancerlectins. Oncotarget, 8(17): 28169-28175. (2016 IF: 5.168)

75. Pengmian Feng, Hui Ding, Hui Yang, Wei Chen*, Hao Lin*, and Kuo-Chen Chou*. (2017) iRNA-PseColl: A seamless platform for identifying the occurrence sites of different RNA modifications by incorporating collective effects of nucleotides into PseKNC. Molecular Therapy - Nucleic Acids, 7: 155–163. (2016 IF: 6.392)

74. Wei Chen*, Hua Tang, Hao Lin*. (2017) MethyRNA: A web-server for identification of N6-methyladenosine sites. Journal of Biomolecular Structure & Dynamics, 35(3): 683-687. (2016 IF: 3.123)

73. Zhi-Yong Liang, Hong-Yan Lai, Huan Yang, Chang-Jian Zhang, Hui Yang, Huan-Huan Wei, Xin-Xin Chen, Ya-Wei Zhao, Zhen-Dong Su, Wen-Chao Li, En-Ze Deng, Hua Tang, Wei Chen*, Hao Lin* (2017) Pro54DB: a database for experimentally verified sigma-54 promoters. Bioinformatics, 33(3): 467-469. (2016 IF: 7.307)

72. Wei Chen*, Pengmian Feng, Hui Yang, Hui Ding, Hao Lin*, Kuo-Chen Chou. (2017) iRNA-AI: identifying the adenosine to inosine editing sites in RNA sequences. Oncotarget, 8(3): 4208-4217. (2016 IF: 5.168)

71. Ting Zhang, Puwen Tan, Liqiang Wang, Nana Jin, Yana Li, Lin Zhang, Huan Yang, Zhenyu Hu, Lining Zhang, Chunyu Hu, Chunhua Li, Kun Qian, Changjian Zhang, Yan Huang, KongningLi*, Hao Lin*, Dong Wang*. (2017) RNALocate: a resource for RNA Subcellular Localizations. Nucleic Acids Research, 45(D1): D135-D138. (2016 IF: 10.162)

2016

70. Chang-Jian Zhang, Hua Tang, Wen-Chao Li, Hao Lin*, Wei Chen*, Kuo-Chen Chou*. (2016) iOri-Human: identify human origin of replication by incorporating dinucleotide physicochemical properties into pseudo nucleotide composition. Oncotarget, 7(43): 69783-69793. (2015 IF: 5.008)

69. Wei Chen*, Pengmian Feng, Hui Ding, Hao Lin*. (2016) PAI: Predicting adenosine to inosine editing sites by using pseudo nucleotide compositions. Scientific Reports, 6:3512. (2015 IF: 5.228)

68. Ya-Wei Zhao, Hong-Yan Lai, Hua Tang, Wei Chen*, Hao Lin*. (2016) Prediction of phosphothreonine sites in human proteins by fusing different features. Scientific Reports, 6:34817. (2015 IF: 5.228)

67. Wei Chen*, Pengmian Feng, Hui Ding, Hao Lin*. (2016) Identifying N6-methyladenosine sites in the Arabidopsis thaliana transcriptome. Molecular Genetics and Genomics, 291(6):2225-2229. (2015 IF: 2.622)

66. Peng-Mian Feng, Hui Ding, Wei Chen*, Hao Lin*. (2016) Identifying RNA 5-methylcytosine sites via pseudo nucleotide compositions. Molecular BioSystems, 12(11):3307-3311. (2015 IF: 2.829)

65. Hui Ding, Wuritu Yang, Hua Tang, Peng-Mian Feng, Jian Huang, Wei Chen*, Hao Lin*. (2016) PHYPred: a tool for identifying bacteriophage enzymes and hydrolases. Virologica Sinica, 31(2): 350-352. (2015 IF: )

64. Huan Yang, Hua Tang, Xin-Xin Chen, Chang-Jian Zhang, Pan-Pan Zhu, Hui Ding, Wei Chen*, Hao Lin*. (2016) Identification of secretory proteins in mycobacterium tuberculosis using pseudo amino acid composition. BioMed Research International, 2016: 5413903. (2015 IF: 2.134)

63. Wei Chen*, Pengmian Feng, Hua Tang, Hui Ding, Hao Lin*. (2016) RAMPred: identifying the N1-methyladenosine sites in eukaryotic transcriptomes. Scientific Reports, 6: 31080. (2015 IF: 5.228)

62. Hua Tang*, Ping Zou, Chunmei Zhang, Rong Chen, Wei Chen*, Hao Lin*. (2016) Identification of apolipoprotein using feature selection technique. Scientific Reports, 6: 30441. (2015 IF: 5.228)

61. Wei Chen*, Hua Tang, Jing Ye, Hao Lin*, Kuo-Chen Chou*. (2016) iRNA-PseU: Identifying RNA pseudouridine sites. Molecular Therapy - Nucleic Acids, 5: e332. (2015 IF: 5.048)

60. Hua Tang*, Zhen-Dong Su, Huan-Huan Wei, Wei Chen, Hao Lin*. (2016) Prediction of cell-penetrating peptides with feature selection techniques. Biochemical and Biophysical Research Communications, 477: 150-154. (2015 IF: 2.371)

59. Xin-Xin Chen, Hua Tang, Wen-Chao Li, Hao Wu, Wei Chen*, Hui Ding*, Hao Lin*. (2016) Identification of Bacterial Cell Wall Lyases via Pseudo Amino Acid Composition. BioMed Research International, 2016: 1654623. (2015 IF: 2.134)

58. Wei Chen*, Pengmian Feng, Hua Tang, Hui Ding, Hao Lin*. (2016) Identifying 2′-O-methylationation sites by integrating nucleotide chemical properties and nucleotide compositions. Genomics, 107: 255-258. (2014 IF: 2.284)

57. Pengmian Feng, Wei Chen*, Hao Lin*. (2016) Identifying antioxidant proteins by using optimal dipeptide compositions. Interdisciplinary Sciences: Computational Life Sciences, 8: 186-191. (2014 IF: 0.662)

56. Yun Wu, Hua Tang, Wei Chen, Hao Lin*. (2016) Predicting human enzyme family classes by using pseudo amino acid composition. Current Proteomics, 13(2): 99-104. (2014 IF: 0.635)

55. Wei Chen*, Hui Ding, Peng-Mian Feng, Hao Lin*, Kuo-Chen Chou*. (2016) iACP: a sequence-based tool for identifying anticancer peptides. Oncotarget, 7(13): 16895-16909. (2014 IF: 6.359)(ESI)

54. Hua Tang*, Wei Chen, Hao Lin*. (2016) Identification of immunoglobulins using Chou’s pseudo amino acid composition with feature selection technique. Molecular BioSystems, 12: 1269-1275. (2014 IF: 3.21)(ESI)

53. Hui Ding*, Zhi-Yong Liang, Feng-Biao Guo, Jian Huang, Wei Chen*, Hao Lin*. (2016) Predicting bacteriophage proteins located in host cell with feature selection technique. Computers in Biology and Medicine, 71: 156–161. (2014 IF: 1.240)

52. Wei Chen*, Pengmian Feng, Hui Ding, Hao Lin*, Kuo-CHen Chou*. (2016) Using deformation energy to analyze nucleosome positioning in genomes. Genomics, 107: 69–75. (2014 IF: 2.284)(ESI)

2015

51. Hao Lin*, Wei-Xin Liu, Jiao He, Xin-Hui Liu, Hui Ding, Wei Chen*. (2015) Predicting cancerlectins by the optimal g-gap dipeptides. Scientific Reports, 5: 16964. (2014 IF: 5.578)

50. Wei Chen*, Pengmian Feng, Hui Ding, Hao Lin*, Kuo-Chen Chou*. (2015) iRNA-Methyl: Identifying N6-methyladenosine sites using pseudo nucleotide compositions. Analytical Biochemistry, 490: 26-33. (2014 IF: 2.219) (ESI, hot)

49. Wei Chen*, Hao Lin*, Kuo-Chen Chou*. (2015) Pseudo nucleotide composition or PseKNC: an effective formulation for analyzing genomic sequences. Molecular BioSystems, 11: 2620-2634. (2014 IF: 3.183) (ESI)

48. Hui Ding*, Dongmei Li*. (2015) Identification of mitochondrial proteins of malaria parasite using analysis of variance. Amino Acids, 47(2): 329-333. (2013 IF: 3.653)

47. Pan-Pan Zhu, Wen-Chao Li, Zhe-Jin Zhong, En-Ze Deng, Hui Ding*, Wei Chen*, Hao Lin*. (2015) Predicting subcellular localization of mycobacterial proteins by incorporating the optimal tripeptides into the general form of pseudo amino acid composition. Molecular Biosystems, 11: 558-563. (2013 IF: 3.183) (ESI)

46. Wen-Chao Li, En-Ze Deng, Hui Ding*, Wei Chen*, Hao Lin* (2015) iORI-PseKNC: a predictor for identifying origin of replication with pseudo k-tuple nucleotide composition. Chemometrics and Intelligent Laboratory Systems, 141: 100-106. (2013 IF: 2.381)

2014

45. Hao Lin*, En-Ze Deng, Hui Ding, Wei Chen*, Kuo-Chen Chou*. (2014) iPro54-PseKNC: a sequence-based predictor for identifying sigma-54 promoters in prokaryote with pseudo k-tuple nucleotide composition. Nucleic Acids Research, 42(21): 12961-12972. (2013 IF: 8.808) (ESI hot)

44. Wen-Chao Li, Zhe-Jin Zhong, Pan-Pan Zhu, En-Ze Deng, Hui Ding*, Wei Chen*,Hao Lin*. (2014) Sequence analysis of origins of replication in the Saccharomyces cerevisiae genomes. Frontiers in Microbiology, 5: 574. (2013 IF: 3.9)

43. Pengmian Feng*, Wei Chen, Hao Lin*. (2014) Prediction of CpG island methylation status by intergrating DNA physicochemical properties. Genomics, 104(4): 229-233. (2013 IF: 2.793)

42. Wei Chen*, Hao Lin*, Pengmian Feng, Jinpeng Wang. (2014) Exon skipping event prediction based on histone modifications. Interdisciplinary Sciences: Computational Life Sciences, 6(3): 241-249. (2013 IF: 0.672)

41. Hui Ding, Hao Lin*, Wei Chen*, Zi-Qiang Li, Feng-Biao Guo, Jian Huang, Nini Rao. (2014) Prediction of protein structural classes based on feature selection technique. Interdisciplinary Sciences: Computational Life Sciences, 6(3): 235-240. (2013 IF: 0.672)

40. Wei Chen*, Peng-Mian Feng, En-Ze Deng, Hao Lin*, Kuo-Chen Chou*. (2014) iTIS-PseTNC: a sequence-based predictor for identifying translation initiation site in human genes using pseudo trinucleotide composition. Analytical Biochemistry, 462: 76-83. (2012 IF: 2.582) (ESI hot)

39. Wei-Xin Liu, En-Ze Deng, Wei Chen, Hao Lin*. (2014) Identifying the subfamilies of voltage-gated potassium channels using feature selection technique. International Journal of Molecular Sciences, 15: 12940-12951. (2012 IF: 2.464)

38. Hui Ding*, Peng-Mian Feng, Wei Chen*, Hao Lin*. (2014) Identification of bacteriophage virion proteins by the ANOVA feature selection and analysis. Molecular Biosystems, 10: 2229-2235. (2012 IF: 3.35)

37. Hui Ding*, En-Ze Deng, Lu-Feng Yuan, Li Liu, Hao Lin*, Wei Chen*, Kuo-Chen Chou. (2014) iCTX-Type: A sequence-based predictor for identifying the types of conotoxins in targeting ion channels. BioMed Research International, ID 286419. (2012 IF: 2.880) (ESI)

36. Shou-Hui Guo, En-Ze Deng, Li-Qin Xu, Hui Ding, Hao Lin*, Wei Chen*, Kuo-Chen Chou*. (2014) iNuc-PseKNC: a sequence-based predictor for predicting nucleosome positioning in genomes with pseudo k-tuple nucleotide composition. Bioinformatics, 30(11): 1522-1529. (2012 IF: 5.323) (ESI hot)

35. Wei Chen*, Peng-Mian Feng, Hao Lin*, Kuo-Chen Chou. (2014) iSS-PseDNC: identifying splicing sites using pseudo dinucleotide composition. BioMed Research International, ID 623149. (2012 IF: 2.880) (ESI)

34. Wei Chen*, Tian-Yu Lei, Dian-Chuan Jin, Hao Lin*, Kuo-Chen Chou*. (2014) PseKNC: a flexible web server for generating pseudo K-tuple nucleotide composition. Analytical Biochemistry, 456: 53-60. (2012 IF: 2.582) (ESI)

33. Pengmian Feng*, Hao Lin*, Wei Chen, Yongchun Zuo. (2014) Predicting the types of J-proteins using clustered amino acids. BioMed Research International, ID 935719. (2012 IF: 2.880)

32. Wei Chen*, Hao Lin*, Pengmian Feng. (2014) DNA physical parameters modulate nucleosome positioning in the Saccharomyces cerevisiae genome.Current Bioinformatics, 9(2): 188-193. (2012 IF: 2.017)

2013

31. Hao Lin*, Wei Chen*, Hui Ding. (2013) AcalPred: A sequence-based tool for discriminating between acidic and alkaline enzymes. PloS One, 8(10): e75726. (2011 IF: 4.092)

30. Peng-Mian Feng, Wei Chen*, Hao Lin*, Kuo-Chen Chou*. (2013) iHSP-PseRAAAC: Identifying the heat shock protein families using pseudo reduced amino acid alphabet composition. Analytical Biochemistry, 442(1): 118-125. (2012 IF: 2.582) (ESI)

29. Peng-Mian Feng, Hao Lin*, Wei Chen*. (2013) Identification of antioxidants from sequence information using Naive Bayes. Computational and Mathematical Methods in Medicine, ID 567529. (2012 IF: 0.791)

28. Hao Lin*, Wei Chen*, Lu-Feng Yuan, Zi-Qiang Li, Hui Ding. (2013) Using over-represented tetrapeptides to predict protein submitochondria locations. Acta Biotheoretica, 61(2): 259-268. (2012 IF: 0.95) {Featured as Key Scientific Article in Global Medical Discovery}

27. Peng-Mian Feng, Hui Ding, Wei Chen*, Hao Lin*. (2013) Naive Bayes classifier with feature selection to identify phage virion proteins.Computational and Mathematical Methods in Medicine, ID 530696. (2012 IF: 0.791)

26. Hui Ding*, Shou-Hui Guo, En-Ze Deng, Lu-Feng Yuan, Feng-Biao Guo, Jian Huang, Nini Rao, Wei Chen*, Hao Lin*. (2013) Prediction of Golgi-resident protein types by using feature selection technique. Chemometrics and Intelligent Laboratory Systems, 124: 9-13. (2012 IF: 2.291)

25. Wei Chen*, Peng-Mian Feng, Hao Lin*, Kuo-Chen Chou*. (2013) iRSpot-PseDNC: Identify recombination spots with pseudo dinucleotide composition.Nucleic Acids Research, 41(6): e68. (2012 IF: 8.278) (ESI)

24. Hao Lin*, Chen Ding, Lu-Feng Yuan, Wei Chen*, Hui Ding, Zi-Qiang Li, Feng-Biao Guo, Jian Huang, Ni-Ni Rao. (2013) Predicting subchloroplast locations of proteins based on the general form of Chou's pseudo amino acid composition: approached from optimal tripeptide composition. International Journal of Biomathematics, 6(2): 1350003. (2012 IF: 0.63)

23. Hui Ding, Hao Lin*, Juan Feng. (2013) The rate of opening and closing of the DNA gate for topoisomerase II. Theory in Biosciences, 132(1): 61-64. (2012 IF: 0.925)

22. Lu-Feng Yuan, Chen Ding, Shou-Hui Guo, Hui Ding*, Wei Chen*, Hao Lin*. (2013) Prediction of the types of ion channel-targeted conotoxins based on Radial Basis Function Network. Toxicology in Vitro, 27: 852-856. (2011 IF: 2.775)

2012

21. Chen Ding, Lu-Feng Yuan, Shou-Hui Guo, Hao Lin*, Wei Chen*. (2012) Identification of mycobacterial membrane proteins and their types using over-represented tripeptide compositions. Journal of Proteomics, 77: 321-328. (2010 IF: 5.074)

20. Wei Chen*, Hao Lin*, Peng-Mian Feng, Chen Ding, Yong-Chun Zuo, Kuo-Chen Chou*. (2012) iNuc-PhysChem: A sequence-based predictor for identifying nucleosomes via physicochemical properties. PLoS One, 7(10): e47843. (2010 IF: 4.411) {Reported by VerticalNews} (ESI)

19. Wei Feng, Hui Ding*, Hao Lin, Liao-Fu Luo. (2012) The lysogeny/lysis switch and entropies of stationary states in λ phage. Acta Physica Sinica (in chinese), 61(16): 168701. (2012 IF: 1.016)

18. Hao Lin*, Chen Ding, Qiang Song, Ping Yang, Hui Ding, Ke-Jun Deng, Wei Chen*. (2012) The prediction of protein structural class using averaged chemical shifts. Journal of Biomolecular Structure & Dynamics, 29(6): 643-648. (2010 IF: 4.986)

17. Wei Chen*, Pengmian Feng, Hao Lin*. (2012) Prediction of replication origins by calculating DNA structural properties. FEBS Letters, 586(6): 934-938. (2012 IF: 3.582)

16. Wei Chen*, Hao Lin*. (2012) Identification of voltage-gated potassium channel subfamilies from sequence information using support vector machine. Computers in Biology and Medicine, 42(4): 504-507. (2012 IF: 1.162)

15. Wei Chen*, Pengmian Feng, Hao Lin*. (2012) Prediction of ketoacyl synthase family using reduced amino acid alphabet. Journal of Industrial Microbiology & Biotechnology, 39(4): 579-584. (2011 IF: 2.735)

2011

14. Hui Ding*, Liao-Fu Luo, Hao Lin. (2011) Entropy production rate changes in lysogeny/lysis switch regulation of bacteriophage lambda.Communications in Theoretical Physics, 55(2): 371-375. (2011 IF: 0.747)

13. Hao Lin*, Qian-Zhong Li. (2011) Eukaryotic and prokaryotic promoter prediction using hybrid approach. Theory in Biosciences, 130(2): 91-100. (2011 IF: 0.979)

12. Hao Lin*, Wei Chen. (2011) Prediction of thermophilic proteins using feature selection technique. Journal of Microbiological Methods, 84(1): 67-70. (2011 IF: 2.086)

11. Hui Ding, Li Liu, Feng-Biao Guo, Jian Huang, Hao Lin*. (2011) Identify Golgi protein types with modified Mahalanobis discriminant algorithm and pseudo amino acid composition. Protein & Peptide Letters, 18(1): 58-63. (2011 IF: 1.942)

10. Hao Lin*, Hui Ding. (2011) Predicting ion channels and their types by the dipeptide mode of pseudo amino acid composition. Journal of Theoretical Biology, 269(1): 64-69. (2011 IF: 2.208)

2010

9. Hao Lin*, Hui Ding, Feng-Biao Guo, Jian Huang. (2010) Prediction of subcellular location of mycobacterial protein using feature selection techniques. Molecular Diversity, 14(4): 667-671. (2010 IF: 3.721)

8. Wei Chen*, Hao Lin*. (2010) Prediction of midbody, centrosome and kinetochore proteins based on gene ontology information. Biochemical and Biophysical Research Communications, 401(3): 382-384. (2010 IF: 2.595)

2009

7. Hui Ding, Liaofu Luo*, Hao Lin. (2009) Prediction of cell wall lytic enzymes using Chou's amphiphilic pseudo amino acid composition. Protein & Peptide Letters, 16(4): 351-355. (2009 IF: 1.755) (ESI)

6. Hao Lin*, Hao Wang, Hui Ding, Ying-Li Chen, Qian-Zhong Li. (2009) Prediction of subcellular localization of apoptosis protein using Chou's pseudo amino acid composition. Acta Biotheoretica, 57(3): 321-330. (2009 IF: 1.394)

5. Hui Ding*, Liaofu Luo. (2009) Kinetic model of the lysogeny/lysis switch of phage λ. Chinese Physics Letter, 26(9):098701. (2009 IF: 0.972)

2008

4. Hao Lin*, Hui Ding*, Feng-Biao Guo, An-Ying Zhang and Jian Huang. (2008) Predicting subcellular localization of mycobacterial proteins by using Chou's pseudo amino acid composition. Protein & Peptide Letters, 15(7): 739-744. (2008 IF: 1.281) (ESI)

3. Hao Lin*. (2008) The modified Mahalanobis Discriminant for predicting outer membrane proteins by using chou's pseudo amino acid composition.Journal of Theoretical Biology, 252(2): 350-356. (2008 IF: 2.454) (ESI)

2007

2. Hao Lin, Qian-Zhong Li*. (2007) Using pseudo amino acid composition to predict protein structural class: approached by incorporating 400 dipeptide components. Journal of Computational Chemistry, 28(9): 1463-1466. (2006 IF: 4.893)

1. Hao Lin, Qian-Zhong Li*. (2007) Predicting conotoxin superfamily and family by using pseudo amino acid composition and modified Mahalanobis discriminant. Biochemical and Biophysical Research Communications, 354(2): 548-551. (2005 IF: 3.0)

 

As co-author:

2016

21. Chuan Dong, Ya-Zhou Yuan, Fa-Zhan Zhang, Hong-Li Hua, Yuan-Nong Ye, Abraham Alemayehu Labena, Hao Lin, Wei Chen, Feng-Biao Guo. (2016) Combining pseudo dinucleotide composition with the Z curve method to improve the accuracy of predicting DNA elements: a case study in recombination spots. Molecular BioSystems, 12(9): 2893-2900. (2015 IF: 2.829).

20. Bifang He, Guoshi Chai, Yaocong Duan, Zhiqiang Yan, Liuyang Qiu, Huixiong Zhang, Zechun Liu, Qiang He, Ke Han, Beibei Ru, Feng-Biao Guo, Hui Ding, Hao Lin, Xianlong Wang, Nini Rao, Peng Zhou, Jian Huang*. (2016) BDB: biopanning data bank. Nucleic Acids Research, 44: D1127-D1132. (2014 IF: 9.112).

2015

19. Wei Chen*, Hong Tran, Zhiyong Liang, Hao Lin, and Liqing Zhang*. (2015) Identification and analysis of the N6-methyladenosine in the Saccharomyces cerevisiae transcriptome. Scientific Reports, 5:13859. (2014 IF: 5.578).

18. Qiang Tang, Fulei Nie, Hui Ding, Peng Zhou, Jian Huang*. (2015) NIEluter: Predicting peptides eluted from HLA class I molecules. Journal of Immunological Methods, 422:22-27. (2013 IF: 2.005).

17. Xiong Wang, Hao Lin, Yu Zheng, Juan Feng, Zujun Yang, Lixia Tang*. (2015) MDC-Analyzer-facilitated combinatorial strategy for improving the activity and stability of halohydrin dehalogenase from Agrobacterium radiobacter AD1. Journal of Biotechnology, 206:1-7. (2013 IF: 2.884).

16. Wei Chen*, Xitong Zhang, Jordan Brooker, Hao Lin, Liqing Zhang*, Kuo-Chen Chou*. (2015) PseKNC-General: A cross-platform package for generating various modes of pseudo nucleotide compositions. Bioinformatics, 31(1):119-120. (2013 IF: 4.621). (ESI)

2014

15. Boyu Li, Nini Rao*, Dingyu Liu, Yang Yang, Dingyun Liu, Hanming Liu, Tao Gan, Hui Ding, Hao Lin. (2014) Analysis of connection networks among miRNAs differentially expressed in early gastric cancer for disclosing some biological features of disease development. Gene, 548(2): 159-165. (2012 IF: 2.196)

14. Lv-Wen Ning, Hao Lin, Hui Ding, Jian Huang, Nini Rao, Feng-Biao Guo. (2014) Predicting bacterial essential genes using only sequence composition information. Genetics and Molecular Research, 13(2): 4564-4572. (2012 IF: 0.994)

13. Yonge Feng*, Hao Lin, Liaofu Luo. (2014) Prediction of protein secondary structure using feature selection and analysis approach. Acta Biotheoretica, 62(1):1-14. (2013 IF: 1.231)

12. Ziqiang Li*, Mingtian Zhou, Lijia Xu, Hao Lin, Haibo Pu.(2014) Training sparse SVM on the core sets of fitting-planes. Neurocomputing, 130: 20-27. (2012 IF: 1.634)

11. Beibei Ru, Peter A.C.'T Hoen, Fulei Nie, Hao Lin, Feng-Biao Guo, Jian Huang*. (2014) Phd7faster: predicting clones propagating faster from the PH.D.-7 phage display peptide library. Journal of Bioinformatics and Computational Biology, 12(1):1450005. (2013 IF: 0.931)

2013

10. Li Liu, Qian-Zhong Li*, Hao Lin, Yong-Chun Zuo. (2013) The effect of regions flanking target site on siRNA potency. Genomics, 102(4): 215-222. (2012 IF: 3.01)

2012

9. Feng-Biao Guo*, Wen Wei, Xian-Long Wang, Hao Lin, Hui Ding, Jian Huang, Nini Rao. (2012) Co-evolution of genomic islands and their bacterial hosts revealed through phylogenetic analyses of 17 groups of homologous genomic islands. Genetics and Molecular Research, 11(4): 3735-3743. (2012 IF: 0.994)

8. Jian Huang*, Beibei Ru, Ping Zhu, Fulei Nie, Jun Yang, Xuyang Wang, Ping Dai, Hao Lin, Feng-biao Guo, Nini Rao. (2012) MimoDB 2.0: a mimotope database and beyond. Nucleic Acids Research, 40(Database issue): D271-D277. (2012 IF: 8.278)

2010

7. Feng-Biao Guo*, Lu-Wen Ning, Jian Huang, Hao Lin, Hui-Xiong Zhang. (2010) Chromosome translocation and its consequence in the genome of Burkholderia cenocepacia AU-1054. Biochemical and Biophysical Research Communications, 403(3-4): 375-379. (2010 IF: 2.595)

6. Jian Huang*, Beibei Ru, Shiyong Li, Hao Lin, Feng-Biao Guo. (2010) SAROTUP: Scanner and reporter of target-unrelated peptides. Journal of Biomedicine and Biotechnology, 2010: 101932. (2010 IF: 1.225)

5. Beibei Ru, Jian Huang*, Ping Dai, Shiyong Li, Zhongkui Xia, Hui Ding, Hao Lin, Feng-Biao Guo, Xianlong Wang. (2010) MimoDB: a new repository for mimotope data derived from phage display technology. Molecules, 15(11): 8279-8288. (2010 IF: 1.988)

2009

4. Feng-Biao Guo*, Hao Lin, Jian Huang. (2009) A plot of G+C content against sequence length of 640 bacterial chromosomes shows the points are widely scattered in the upper triangular area. Chromosome Research, 17(3): 359-364. (2009 IF: 3.23)

2006

3. Qian-Zhong Li*, Hao Lin. (2006) The recognition and prediction of σ70 promoters in Escherichia coli K-12. Journal of Theoretical Biology, 242(1): 135-141. (2006 IF: 2.264)

2. Liaofu Luo*, Joseph Molnar, Hui Ding, Xiaogui Lv, Gabriella Spengler. (2006) Physicochemical attack against solid tumors based on the reversal of direction of entropy flow: an attempt to introduce thermodynamics in anticancer therapy. Diagnostic Pathology,1: 43. (2009 IF: 1.29)

1. Liaofu Luo*, Joseph Molnar, Hui Ding, Xiaogui Lv, Gabrilla Splengler. (2006) Ultrasound absorption and entropy production in biological tissue: a novel approach to anticancer therapy. Diagnostic Pathology, 1: 35. (2009 IF: 1.29)